Contents:
pdm_utils
pdm_utils.classes
pdm_utils.classes.alchemyhandler
pdm_utils.classes.aragornhandler
pdm_utils.classes.bundle
pdm_utils.classes.cds
pdm_utils.classes.cdspair
pdm_utils.classes.dbcomparesummary
pdm_utils.classes.evaluation
pdm_utils.classes.fileio
pdm_utils.classes.filter
pdm_utils.classes.genome
pdm_utils.classes.genomepair
pdm_utils.classes.genometriad
pdm_utils.classes.randomfieldupdatehandler
pdm_utils.classes.source
pdm_utils.classes.ticket
pdm_utils.classes.tmrna
pdm_utils.classes.trna
pdm_utils.classes.trnascansehandler
pdm_utils.constants
pdm_utils.constants.constants
pdm_utils.constants.db_schema_0
pdm_utils.constants.eval_descriptions
pdm_utils.constants.schema_conversions
pdm_utils.functions
pdm_utils.functions.annotation
pdm_utils.functions.basic
pdm_utils.functions.cartography
pdm_utils.functions.configfile
pdm_utils.functions.eval_modes
pdm_utils.functions.fileio
pdm_utils.functions.flat_files
pdm_utils.functions.mysqldb
pdm_utils.functions.mysqldb_basic
pdm_utils.functions.ncbi
pdm_utils.functions.parallelize
pdm_utils.functions.parsing
pdm_utils.functions.phagesdb
pdm_utils.functions.phameration
pdm_utils.functions.pipelines_basic
pdm_utils.functions.querying
pdm_utils.functions.server
pdm_utils.functions.tickets
pdm_utils.pipelines
pdm_utils.pipelines.compare_db
pdm_utils.pipelines.convert_db
pdm_utils.pipelines.export_db
pdm_utils.pipelines.find_domains
pdm_utils.pipelines.freeze_db
pdm_utils.pipelines.get_data
pdm_utils.pipelines.get_db
pdm_utils.pipelines.get_gb_records
pdm_utils.pipelines.import_genome
pdm_utils.pipelines.pham_finder
pdm_utils.pipelines.phamerate
pdm_utils.pipelines.push_db
pdm_utils.pipelines.revise
pdm_utils.pipelines.update_field
pdm_utils.run